BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D03SP1|AL425109
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1115 1732 0.0
>3x_Contig1115
Length = 4702
Score = 1732 bits (872), Expect = 0.0
Identities = 907/918 (98%), Gaps = 2/918 (0%)
Strand = Plus / Minus
Query: 2 attctttgcctcatccaattttttttgagcctggaaatcctgattttggatacggctagc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2790 attctttgcctcatccaattttttttgagcctggaaatcctgattttggatacagctagc 2731
Query: 62 atatttgtttgattctattgtagaaaagaatgtgtctacggtattattgtacattccgcc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2730 atatttgtttgattctattgtagaaaagaatgtgtctacggtattattgtacattccgcc 2671
Query: 122 gatttcgataattttgacgtcagtggaatctcctacaaagggtttgaagggatggaaatt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2670 gatttcgataattttgacgtcagtggaatctcctacaaagggtttgaagggatggaaatt 2611
Query: 182 tgaaaaagtgtattcaagttccggcttgtctcttaaaggatcgtacagtttgttcttatg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2610 tgaaaaagtgtattcaagttccggcttgtctcttaaaggatcgtacagtttgttcttatg 2551
Query: 242 agccactatataacctattcttgttgacgtagtcgagatcaatttatttgcttgaacttc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2550 agccactatataacctattcttgttgacgtagtcgagatcaatttatttgcttgaacttc 2491
Query: 302 taatgaggacattaagtcaacaagcacagagacattgtgtttaaactcaagacacgaaga 361
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2490 taatgaagacattaagtcaacaagcacagagacattgtgtttaaactcaagacacgaaga 2431
Query: 362 agatggatcaataccaatagctttcaacgagttttgaatcaaatcacttgataaatgtgg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2430 agatggatcaataccaatagctttcaacgagttttgaatcaaatcacttgataaatgtgg 2371
Query: 422 agcatgaacaaataamagtttttgaatagacggaacagatgcttttcccttgagtttacc 481
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2370 agcatgaacaaataaaagtttttgaatagacggaacagatgcttttcccttgagtttacc 2311
Query: 482 ttttttagcctctccgggcacaattgtgcttttggctttaacgtcggcttctttcaacca 541
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2310 ttttttagcctctccaggcacaattgtgcttttggctttaacgtcagcttctttcaacca 2251
Query: 542 atctgctatttcattttcgaaatattccttaggatcaggaaccgtagttgaagtttggtt 601
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2250 atctgctattttattttcgaaatattccttaggatcaagaaccgtagttgaagtttggtt 2191
Query: 602 aatttctgcaaagttggccatgtcataaaaytcaccaactttcatcgaataatcatcgac 661
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2190 aatttctgcaaagttggccatgtcataaaattcaccaactttcatcgaataatcatcgac 2131
Query: 662 aactctctgtagtaaaagaattttttggtcagcatccaataaaagcacatttccggcact 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2130 aactctctgtagtaaaagaattttttggtcagcatccaataaaagcacatttccggcact 2071
Query: 722 gaaaaattctaaaacaaggtagtacttaccatcagcaaaagtaaacacaattattctgtc 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2070 gaaaaattctaaaacaaggtagtacttaccatcagcaaaagtaaacacaattattctgtc 2011
Query: 782 atttgggatctgcttaactgccgtcaatcgtttttctttcaaatacgatctcaatttgga 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2010 atttgggatctgcttaactgccgtcaatcgtttttctttcaaatacgatctcaatttgga 1951
Query: 842 aacaaa-cacgaaggagttsgggggaatcggcctggtaaagtcagtagtatgaactcgca 900
|||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1950 aacaaaccacgaaggag-tcgggggaatcggcctggtaaagtcagtagtatgaactcgca 1892
Query: 901 atccgcaatcaatgacaa 918
||||||||||||||||||
Sbjct: 1891 atccgcaatcaatgacaa 1874
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7980
Number of Sequences: 1807
Number of extensions: 7980
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)